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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009305 chr22:50100662 A/G DGCR2 chr22:19023795-19109967:- 0.73 6.54 1.62E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G DNAL4 chr22:39174513-39190203:- 0.63 6.33 5.56E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G DRG1 chr22:31795509-31926620:+ 0.71 7.41 5.71E-13 Box Plot
THCA rs6009305 chr22:50100662 A/G EIF3D chr22:36906897-36925483:- 0.59 6.48 2.35E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G EIF3L chr22:38244875-38285414:+ 0.66 6.49 2.09E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G EIF4ENIF1 chr22:31832963-31892094:- 0.62 5.97 4.52E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G EP300 chr22:41487790-41576083:+ 0.48 6.66 7.75E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G GGA1 chr22:38004482-38029571:+ 0.64 6.73 4.92E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G GRAMD4 chr22:46971909-47075687:+ 0.68 6.01 3.64E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G GTPBP1 chr22:39101728-39134304:+ 0.61 6.48 2.28E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G HPS4 chr22:26839389-26879803:- 0.62 6.1 2.13E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G HSCB chr22:29138019-29153503:+ 0.59 6.63 9.27E-11 Box Plot
THCA rs6009305 chr22:50100662 A/G KLHL22 chr22:20795806-20850170:- 0.59 6 3.97E-9 Box Plot
THCA rs6009305 chr22:50100662 A/G L3MBTL2 chr22:41601209-41627275:+ 0.74 6.4 3.66E-10 Box Plot
THCA rs6009305 chr22:50100662 A/G LZTR1 chr22:21333751-21353327:+ 0.65 6.71 5.65E-11 Box Plot